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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015832548.1_cds_XP_016504952.1_18339
CDS Infomation

[gene=LOC107822881] [db_xref=GeneID:107822881] [protein=long chain base biosynthesis protein 1-like isoform X2] [protein_id=XP_016504952.1] [location=complement(join(127237..127413,127523..127650,127741..127882,128005..128100,128178..128318,128817..128991,129836..129968,130074..130146,130233..130326,131356..131384))] [gbkey=CDS]
Sequence

ATGAAACATGAACCTCCGGTTTTGGAAAGTGCTGCAGGGCCTCATACTATAGTTAATGGG
AAAGACGTAGTGAACTTCACTTCAGCAAATTACCTTGGATTATTAGGAAGCAAAGAATTA
CTAGAGACTTGTACTTCAGCTCTAGAGAAGTATGGTGTAGGTTCTTGTGGTCCCCGGGGA
TTCTATGGCACAATTGATGTCCACCTTGATTGTGAGGCTAGAATAGCAAAGTTTCTGGGA
ACTCCAGACTCTATACTCTACTCCTATGGACTTTCTACGATGTTCAGTGCAATTCCAGCA
TTTTGCAAAAAGGGAGATGTTGTTATTGCGGATGAAGGTGTTCACTGGGGAATCCAGAAT
GGCCTCCAGCTCTCTAGAAGTACCATCATATACTTTAAGCATAACAATATGGAGTCCTTG
CGAAATACTTTGGAGAAAGTAACCCAAGAAAACAAACAAGCTAAGAAGTTACGGCGCTAT
ATCGTTGTTGAAGCTGTGTATCAGAATTCTGGCAAAGTAGCTCCTTTAGATGAAATCATC
AAGTTGAAGGAAAAATATCGATTCCGTGTGTTGTTGGATGAAAGCAATTCCATTGGTGTG
CTTGGCAGTTCTGGTAGAGGTCTAACTGAACATTGTAAAGTTCCGGCTGACAGGATAGAT
ATAATAACTGCGGCAATGGGACATGCATTGGCCACAGAAGGTGGCTTTTGCACAGGGAAT
GCTAGAGTCATTGATCACCAGCGCCTCAGTAGTTCTGGTTATGTCTTCTCTGCTTCACTG
CCTCCTTACTTAGCAAGTGCTGCGATTAAGGCTATTGATATCGTGGAAGAAAAACCTGAA
CTTCTTGTCAAACTGAGGCAAAATATTGCTACGCTGACTAAAGGTTTATCAGATATAAAA
GGCTTAGAATTAGTCAGTGATCCGCTCTCCCCTATTATATTTCTTACATTAAAGAAGTCC
ATTGGTACTTCAAAGGGTGATTTACAAGTGCTTGAAGATATAGCTGATCATGTGTTAAAG
GAAGATTCTGTCTTTATTGTGACTTCAAAGAGATCAACTCTTGATAAATGTAAGCTGCCA
GTTGGAATTAGATTATTTGTCTCGGCAGCTCATACAGAATCCGATCTGGTGAAAGCCAGT
GAAGCATTGAAAAGAGCAGCGGCATCACTATTGCCAGTTCATGATTGA

Peptide Sequence

PEP ID

XP_016504952.1
PEP Infomation

PREDICTED: long chain base biosynthesis protein 1-like isoform X2 [Nicotiana tabacum]
Sequence

MKHEPPVLESAAGPHTIVNGKDVVNFTSANYLGLLGSKELLETCTSALEKYGVGSCGPRG
FYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPAFCKKGDVVIADEGVHWGIQN
GLQLSRSTIIYFKHNNMESLRNTLEKVTQENKQAKKLRRYIVVEAVYQNSGKVAPLDEII
KLKEKYRFRVLLDESNSIGVLGSSGRGLTEHCKVPADRIDIITAAMGHALATEGGFCTGN
ARVIDHQRLSSSGYVFSASLPPYLASAAIKAIDIVEEKPELLVKLRQNIATLTKGLSDIK
GLELVSDPLSPIIFLTLKKSIGTSKGDLQVLEDIADHVLKEDSVFIVTSKRSTLDKCKLP
VGIRLFVSAAHTESDLVKASEALKRAAASLLPVHD

Transcript Sequence

Gene sequence data has not been registered.